Pirate Ship may refer to any of the following:
- Cannon Boat, enemies in Phantom Hourglass and Spirit Tracks.
- Pirate Ship (Enemy), ship used by Miniblins and Big Blins in Phantom Hourglass and Spirit Tracks.
- The Pirate Ship, a ship home to the crew of Stalfos Pirates in Freshly-Picked Tingle's Rosy Rupeeland.
- The Pirate Ship, a ship staffed by the Cap'n and his crew of Piratians in Oracle of Ages and Oracle of Seasons.
- Tetra's Ship, ship used by Tetra and her crew of pirates in The Wind Waker and Phantom Hourglass.
- Warship, enemies in The Wind Waker.